yeah, the leveling is key. Without it how can they meet the floormaker's specs of 3/16" every 10'? I guess they don't. Maybe they are relying on the underlayment to smooth things out.
I've gone over the floor with a straightedge and rolled a marble around to get a general idea of the low/high spots. Maybe I'll try screeding a spot like you did, see how that goes. Perhaps call a few more installers....
More I think about it all, the more I wonder if the whole idea of floating a floor on top of gypcrete which is on top of wood subfloor is a good idea. The woodfloor subfloor probably expands and contracts at a different rate than the gypcrete, so whatever I patching I do will likely crack where existing cracks are.